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| UnknownMatrix (Rcpp::RObject seed, const UnknownMatrixOptions &opt) |
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| UnknownMatrix (Rcpp::RObject seed) |
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Index_ | nrow () const |
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Index_ | ncol () const |
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bool | is_sparse () const |
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double | is_sparse_proportion () const |
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bool | prefer_rows () const |
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double | prefer_rows_proportion () const |
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bool | uses_oracle (bool) const |
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std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > | dense (bool row, const tatami::Options &opt) const |
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std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > | dense (bool row, Index_ block_start, Index_ block_length, const tatami::Options &opt) const |
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std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > | dense (bool row, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > | dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > | dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, Index_ block_start, Index_ block_length, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > | dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const |
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template<bool oracle_, template< bool, bool, typename, typename, typename, typename > class FromSparse_, typename ... Args_> |
std::unique_ptr< tatami::SparseExtractor< oracle_, Value_, Index_ > > | populate_sparse_internal (bool row, Index_ non_target_length, tatami::MaybeOracle< oracle_, Index_ > oracle, const tatami::Options &opt, Args_ &&... args) const |
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template<bool oracle_> |
std::unique_ptr< tatami::SparseExtractor< oracle_, Value_, Index_ > > | populate_sparse (bool row, tatami::MaybeOracle< oracle_, Index_ > ora, const tatami::Options &opt) const |
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template<bool oracle_> |
std::unique_ptr< tatami::SparseExtractor< oracle_, Value_, Index_ > > | populate_sparse (bool row, tatami::MaybeOracle< oracle_, Index_ > ora, Index_ block_start, Index_ block_length, const tatami::Options &opt) const |
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template<bool oracle_> |
std::unique_ptr< tatami::SparseExtractor< oracle_, Value_, Index_ > > | populate_sparse (bool row, tatami::MaybeOracle< oracle_, Index_ > ora, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const |
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std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > | sparse (bool row, const tatami::Options &opt) const |
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std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > | sparse (bool row, Index_ block_start, Index_ block_length, const tatami::Options &opt) const |
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std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > | sparse (bool row, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > | sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > | sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, Index_ block_start, Index_ block_length, const tatami::Options &opt) const |
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std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > | sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > ora, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row () const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (Index_ block_start, Index_ block_length) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_row (std::vector< Index_ > indices) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column () const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (Index_ block_start, Index_ block_length) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > > | dense_column (std::vector< Index_ > indices) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< OracularDenseExtractor< Value_, Index_ > > | dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row () const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (Index_ block_start, Index_ block_length) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_row (std::vector< Index_ > indices) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column () const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (Index_ block_start, Index_ block_length) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > > | sparse_column (std::vector< Index_ > indices) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const |
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std::unique_ptr< OracularSparseExtractor< Value_, Index_ > > | sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const |
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template<typename Value_, typename Index_, typename CachedValue_ = Value_, typename CachedIndex_ = Index_>
class tatami_r::UnknownMatrix< Value_, Index_, CachedValue_, CachedIndex_ >
Unknown matrix-like object in R.
- Template Parameters
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Value_ | Numeric type of data value for the interface. |
Index_ | Integer type for the row/column indices, for the interface. |
Pull data out of an unknown matrix-like object by calling methods from the DelayedArray package via Rcpp. This effectively extends tatami to work with any abstract numeric matrix that might be consumed by an R function.
Instances of class should only be constructed and destroyed in a serial context, specifically on the same thread running R itself. Calls to its methods may be parallelized but some additional effort is required to serialize calls to the R API; see executor()
for more details.