Matrix of custom dense chunks. More...

#include <CustomDenseChunkedMatrix.hpp>

Inheritance diagram for tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >:

Collaboration diagram for tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >:

Public Member Functions
	CustomDenseChunkedMatrix (std::shared_ptr< Manager_ > manager, const CustomDenseChunkedMatrixOptions &opt)

Index_	nrow () const

Index_	ncol () const

bool	prefer_rows () const

bool	uses_oracle (bool) const

double	prefer_rows_proportion () const

bool	is_sparse () const

double	is_sparse_proportion () const

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > >	dense (bool row, const tatami::Options &opt) const

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > >	dense (bool row, Index_ block_start, Index_ block_length, const tatami::Options &opt) const

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > >	dense (bool row, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > >	dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > >	dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > >	dense (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > >	sparse (bool row, const tatami::Options &opt) const

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > >	sparse (bool row, Index_ block_start, Index_ block_length, const tatami::Options &opt) const

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > >	sparse (bool row, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > >	sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > >	sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const tatami::Options &opt) const

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > >	sparse (bool row, std::shared_ptr< const tatami::Oracle< Index_ > > oracle, tatami::VectorPtr< Index_ > indices_ptr, const tatami::Options &opt) const

Public Member Functions inherited from tatami::Matrix< Value_, Index_ >
std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row () const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (Index_ block_start, Index_ block_length) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_row (std::vector< Index_ > indices) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column () const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (Index_ block_start, Index_ block_length) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< MyopicDenseExtractor< Value_, Index_ > >	dense_column (std::vector< Index_ > indices) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< OracularDenseExtractor< Value_, Index_ > >	dense_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row () const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (Index_ block_start, Index_ block_length) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_row (std::vector< Index_ > indices) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_row (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column () const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (Index_ block_start, Index_ block_length) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< MyopicSparseExtractor< Value_, Index_ > >	sparse_column (std::vector< Index_ > indices) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices, const Options &opt) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, Index_ block_start, Index_ block_length) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, VectorPtr< Index_ > indices_ptr) const

std::unique_ptr< OracularSparseExtractor< Value_, Index_ > >	sparse_column (std::shared_ptr< const Oracle< Index_ > > oracle, std::vector< Index_ > indices) const

Additional Inherited Members
Public Types inherited from tatami::Matrix< Value_, Index_ >
typedef Value_	value_type

typedef Index_	index_type

Detailed Description

template<typename Value_, typename Index_, typename ChunkValue_, class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>
class tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >

Matrix of custom dense chunks.

Template Parameters

Value_	Numeric type for the matrix value.
Index_	Integer type for the row/column indices.
ChunkValue_	Numeric type of the values in each chunk.
Manager_	Class that implements the `CustomDenseChunkedMatrixManager` interface.

Implements a tatami::Matrix subclass where data is contained in dense rectangular chunks. These chunks are typically compressed in some manner to reduce memory usage compared to, e.g., a tatami::DenseMatrix. On access, the relevant chunks are decompressed and the desired values are extracted. Each dimension should be divided into chunk boundaries at regular intervals starting from zero; this partitions the matrix according to a regular grid where each grid entry is a single chunk of the same size. The exception is for chunks at the non-zero boundaries of the matrix dimensions, which may be truncated.

Constructor & Destructor Documentation

◆ CustomDenseChunkedMatrix()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::CustomDenseChunkedMatrix	(	std::shared_ptr< Manager_ >	manager,
		const CustomDenseChunkedMatrixOptions &	opt )

inline

Parameters

manager	Pointer to a `CustomDenseChunkedMatrixManager` instance that manages the chunks for this matrix.
opt	Further options for chunked extraction.

Member Function Documentation

◆ nrow()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

Index_ tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::nrow ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ ncol()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

Index_ tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::ncol ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ prefer_rows()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

bool tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::prefer_rows ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ uses_oracle()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

bool tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::uses_oracle ( bool ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ prefer_rows_proportion()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

double tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::prefer_rows_proportion ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ is_sparse()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

bool tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::is_sparse ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ is_sparse_proportion()

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

double tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::is_sparse_proportion ( ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [1/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [2/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		Index_	block_start,
		Index_	block_length,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [3/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		tatami::VectorPtr< Index_ >	indices_ptr,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [4/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [5/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		Index_	block_start,
		Index_	block_length,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ dense() [6/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularDenseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::dense	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		tatami::VectorPtr< Index_ >	indices_ptr,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [1/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [2/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		Index_	block_start,
		Index_	block_length,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [3/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::MyopicSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		tatami::VectorPtr< Index_ >	indices_ptr,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [4/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [5/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		Index_	block_start,
		Index_	block_length,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

◆ sparse() [6/6]

template<typename Value_ , typename Index_ , typename ChunkValue_ , class Manager_ = CustomDenseChunkedMatrixManager<ChunkValue_, Index_>>

std::unique_ptr< tatami::OracularSparseExtractor< Value_, Index_ > > tatami_chunked::CustomDenseChunkedMatrix< Value_, Index_, ChunkValue_, Manager_ >::sparse	(	bool	row,
		std::shared_ptr< const tatami::Oracle< Index_ > >	oracle,
		tatami::VectorPtr< Index_ >	indices_ptr,
		const tatami::Options &	opt ) const

inlinevirtual

Implements tatami::Matrix< Value_, Index_ >.

The documentation for this class was generated from the following file:

tatami_chunked/CustomDenseChunkedMatrix.hpp

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ CustomDenseChunkedMatrix()

Member Function Documentation

◆ nrow()

◆ ncol()

◆ prefer_rows()

◆ uses_oracle()

◆ prefer_rows_proportion()

◆ is_sparse()

◆ is_sparse_proportion()

◆ dense() [1/6]

◆ dense() [2/6]

◆ dense() [3/6]

◆ dense() [4/6]

◆ dense() [5/6]

◆ dense() [6/6]

◆ sparse() [1/6]

◆ sparse() [2/6]

◆ sparse() [3/6]

◆ sparse() [4/6]

◆ sparse() [5/6]

◆ sparse() [6/6]