tatami/tatami_8hpp_source.html

#ifndef TATAMI_TATAMI_HPP

#define TATAMI_TATAMI_HPP


#include "dense/DenseMatrix.hpp"

#include "dense/convert_to_dense.hpp"

#include "dense/transpose.hpp"


#include "sparse/CompressedSparseMatrix.hpp"

#include "sparse/FragmentedSparseMatrix.hpp"

#include "sparse/convert_to_compressed_sparse.hpp"

#include "sparse/convert_to_fragmented_sparse.hpp"

#include "sparse/compress_sparse_triplets.hpp"


#include "isometric/unary/DelayedUnaryIsometricOperation.hpp"

#include "isometric/unary/arithmetic_helpers.hpp"

#include "isometric/unary/math_helpers.hpp"

#include "isometric/unary/compare_helpers.hpp"

#include "isometric/unary/boolean_helpers.hpp"

#include "isometric/unary/substitute_helpers.hpp"

#include "isometric/unary/mock_helpers.hpp"


#include "isometric/binary/DelayedBinaryIsometricOperation.hpp"

#include "isometric/binary/arithmetic_helpers.hpp"

#include "isometric/binary/compare_helpers.hpp"

#include "isometric/binary/boolean_helpers.hpp"

#include "isometric/binary/mock_helpers.hpp"


#include "other/DelayedBind.hpp"

#include "other/DelayedCast.hpp"

#include "other/DelayedTranspose.hpp"

#include "other/ConstantMatrix.hpp"


#include "subset/DelayedSubsetBlock.hpp"

#include "subset/make_DelayedSubset.hpp"


#include "utils/wrap_shared_ptr.hpp"

#include "utils/ArrayView.hpp"

#include "utils/SomeNumericArray.hpp"

#include "utils/ConsecutiveOracle.hpp"

#include "utils/parallelize.hpp"

#include "utils/FixedOracle.hpp"

#include "utils/process_consecutive_indices.hpp"


namespace tatami {}


#endif

ArrayView.hpp
Defines a tatami-compatible array view.

CompressedSparseMatrix.hpp
Compressed sparse matrix representation.

ConsecutiveOracle.hpp
Iterate across consecutive elements of the target dimension.

ConstantMatrix.hpp
Matrix of constant values.

DelayedBinaryIsometricOperation.hpp
Delayed binary isometric operations.

DelayedBind.hpp
Delayed combining of multiple tatami::Matrix objects.

DelayedCast.hpp
Delayed cast to another interface type.

DelayedSubsetBlock.hpp
Delayed subsetting to a single contiguous block.

DelayedTranspose.hpp
Delayed transposition.

DelayedUnaryIsometricOperation.hpp
Delayed unary isometric operations.

DenseMatrix.hpp
Dense matrix representation.

FixedOracle.hpp
Iterate across a fixed sequence of elements on the target dimension.

FragmentedSparseMatrix.hpp
Fragmented sparse matrix representation.

SomeNumericArray.hpp
Defines an array class with run-time numeric type.

arithmetic_helpers.hpp
Helper classes for binary arithmetic operations.

boolean_helpers.hpp
Helper classes for binary boolean operations.

compare_helpers.hpp
Helper classes for binary comparison operations.

mock_helpers.hpp
Expectations for tatami::DelayedBinaryIsometricOperation helpers.

compress_sparse_triplets.hpp
Convert sparse data in triplet format to a compressed sparse row/column format.

convert_to_compressed_sparse.hpp
Convert a matrix into a compressed sparse format.

convert_to_dense.hpp
Convert a matrix into a dense format.

convert_to_fragmented_sparse.hpp
Convert a matrix into a fragmented sparse format.

make_DelayedSubset.hpp
Make a delayed subset wrapper based on row/column indices.

math_helpers.hpp
Helpers for unary math operations.

tatami
Flexible representations for matrix data.
Definition Extractor.hpp:15

parallelize.hpp
Parallelized iteration over a tatami::Matrix.

process_consecutive_indices.hpp
Utility to process consecutive indices.

substitute_helpers.hpp
Helper classes for delayed unary isometric substitution.

transpose.hpp
Transpose a dense array.

arithmetic_helpers.hpp
Helper classes for delayed unary isometric arithmetic.

boolean_helpers.hpp
Helper classes for delayed unary isometric boolean operations.

compare_helpers.hpp
Helper classes for delayed unary isometric comparison operations.

mock_helpers.hpp
Expectations for tatami::DelayedUnaryIsometricOperation helpers.

wrap_shared_ptr.hpp
Wrap a raw tatami::Matrix pointer inside a mock shared pointer.